Gene tritu_pan_p016385
| Sequence ID | tritu_pan_p016385 add to my list |
|---|---|
| Species | Triticum turgidum |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 416aa |
Length: 416 amino acids
>tritu_pan_p016385_TRITU MGFLSLLVVASMPIVQVLLIGVIGAFLASGYSKVLTASARRDMNKVVFTVFTPSLIFANL AKTVTLSDVISWWFMPVNIAITFLVGSALGWLACKILKPPPHFRGLIMAFCSAGNLGNLL LIVVPAVCDEDGNPFGSDRNQCRSRGLSYSSLSMALGGLFIWTYTYSLMQKSGKLYHKMQ SKSIQCPADSDEEHLEGFKAGDEEAALPASARPEEQNEGSQIEAPLLSCESDVANNKGFW TNLKEAVHQLIEELMAPPTISAIIGFVVGLVPWLKSLIIGEGAPLRVIQDSLELMGNGTI PCITLILGGNLTQGLRKSVLKRTVIMAIVCIRYVAMPVIGIAVVRVAHGVGFLPHDPLYR YVLMMQSALPPAMNIGTMAQLFDVGQEECSVIFLWTYLVAAVALTTWSTVFMSILS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for tritu_pan_p016385
Represented sequence(s):
TRITU_Svevo_v2.0
TRITU_Zavitan_v1.1
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. TRIDC5Bv2G163270.2 | 0.00 | 3.82 | 2.18 | 0.96 | 3.68 |
| 2. TRIDCUv2G035100.6 | 3.82 | 0.00 | 4.18 | 4.18 | -0.00 |
| 3. TraesCS5D02G361600.2 | 2.18 | 4.18 | 0.00 | 2.18 | 4.18 |
| 4. TraesCS5B02G356700.1 | 0.96 | 4.18 | 2.18 | 0.00 | 4.18 |
| 5. TraesCS5A02G354300.1 | 3.68 | -0.00 | 4.18 | 4.18 | 0.00 |