Gene tritu_pan_p022314
| Sequence ID | tritu_pan_p022314 add to my list | ||
|---|---|---|---|
| Species | Triticum turgidum | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 151aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 151 amino acids
>tritu_pan_p022314_TRITU MGVLDHLSDLCSMTDTKAALKLRKRRPMQTVNIKVKMDCEGCERRVKNAVKSIRGVTAVS VNPKMSKVTVTGFVEPSKVLARVKSTGKVAEMWPYVPYSLTTYPYVGGAYDKKAPAGFVR GAPQAMADPGAPEVRYMNMFNDEDVNSCAIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP040065 | Unannotated cluster |
| 4 | GP463678 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for tritu_pan_p022314
Represented sequence(s):
TRITU_Svevo_v2.0
TRITU_Zavitan_v1.1
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. TRIDC2Bv2G136840.1 | 0.00 | 0.66 | -0.00 | -0.00 | -0.00 |
| 2. TRIDC2Av2G171510.1 | 0.66 | 0.00 | 0.66 | 0.66 | 0.66 |
| 3. TraesCS2A02G287200.1 | -0.00 | 0.66 | 0.00 | -0.00 | -0.00 |
| 4. TraesCS2B02G304100.1 | -0.00 | 0.66 | -0.00 | 0.00 | -0.00 |
| 5. TraesCS2D02G285700.1 | -0.00 | 0.66 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| cajca.ICPL87119.gnm1.ann1.C.cajan_29968.1 | orthology | 1 | 3 | - | - |
| cicar_pan_p023670 | orthology | 0.942 | 1 | - | - |
| medtr_pan_p021226 | orthology | 0.994 | 1 | - | - |
| phavu.G19833.gnm2.ann1.Phvul.003G022400.1 | orthology | 1 | 2 | - | - |
| soybn_pan_p016584 | orthology | 1 | 3 | - | - |