Gene tritu_pan_p045179
Sequence ID | tritu_pan_p045179 add to my list | ||
---|---|---|---|
Species | Triticum turgidum | ||
Alias | No gene alias | ||
Pangenome status | Dispensable (1/2) | ||
Length | 381aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 381 amino acids
>tritu_pan_p045179_TRITU MASGEAAMQTFVLRVTIHCHGCKKKVRKVLKSIEGTSATLLLLLAPLHFRVAFGLIDYLT KWSSFWLGCSGVQDVKVDAQLHKVMVTGTVDAETLIKRLHKSGKQALPWQHTPAKNPDPA PPTPADAPAPAEDGSKDAAVADKKPAEEPQADSSDKRPEQETASEKKKPETEKEAESEKK AGKEEEAKPRSSDEEKKDGGEGAAAEPKAEGTEPASEPAAAAKEAGDDEGEAKKKQSKPK DADRSLSPAPAPAHVPRYAHQEFNAPQPVMSYNMAQPRASVSHYAPQPERGYSQQQAGYS SYSMMQHPPAPAQQAYSQQAQPMQQWSPSYLYMPYPHASPESYYQDYYSPPGTHASPPPP PPLHDSYRLFDDENPNSCSVM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for tritu_pan_p045179
Represented sequence(s):
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
AUR62008611-RA | orthology | 1 | 4 | - | - |
Bv7_164120_fciq.t1 | orthology | 1 | 4 | - | - |
HORVU4Hr1G046610.1 | orthology | 0.15 | 1 | - | - |
evm_27.model.AmTr_v1.0_scaffold00016.303 | orthology | 1 | 2 | - | - |
tritu_pan_p002683 | ultra-paralogy | 0.0413 | 0 | - | - |
tritu_pan_p044639 | ultra-paralogy | 0.0723 | 0 | - | - |
tritu_pan_p051083 | ultra-paralogy | 0.268 | 0 | - | - |