Gene tritu_pan_p048029


Sequence ID tritu_pan_p048029  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 161aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 161 amino acids

>tritu_pan_p048029_TRITU
MGGGIKQLLASLLGAVGGGQRGAKKESTRPQPQTVELRVRMDCERCERQVKKALAGMRGV
ERVEVNRKQQRVTVTGVVDPHKVLRRAQSTGKKAELWPRNHHHPGYDDNSAAVTAHYGAI
GAAQAHGRWAPSPYRRNADAASAEQIASLFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p048029



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS6D02G282300.1
Unrepresented genome(s):
TRITU_Svevo_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HanXRQChr11g0339531 orthology 1 3 - -
Sspon.04G0003210-2C orthology 0.634 3 - -
bradi_pan_p043115 orthology 0.519 2 146 9.05e-46
maize_pan_p029187 orthology 0.681 4 139 2.33e-42
orysa_pan_p045119 orthology 0.53 2 169 1.6e-54
sorbi_pan_p004683 orthology 0.606 4 134 1.02e-40
tritu_pan_p006814 ultra-paralogy 0.0746 0 - -