Gene tritu_pan_p050203


Sequence ID tritu_pan_p050203  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 406aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 406 amino acids

>tritu_pan_p050203_TRITU
MHPRTHIYVCTHWSAPFSDRSITNLRSRNRAHTMAKTRAKKAAAAGDARSAGKEGDKAPA
KGGSDAPADGVVVSVPVHCDGCARKVRRSLLRLEGVEDVIVDHSTNTVVVTGQKALENPI
MVVEAVKMKTGKKAVLLSPSPEKLPPPVKSEDTKKHGAGAPDMKKDVAEFDMEMVVVLKI
ELHCEDCSEEMKKRILKIKGVEEAVPHIKSSQLMVKGMVEPATLVGFIHKCTGRKAAIIR
AEPLNEDTPAAAMAEETPAADANAEKQEPSDNLENKDELGVEEETKQAVNREEETETEKP
SKGDVDGVEKETVVEETQGKEHLFKLPVPASLVAVAPEAEKMTAMNGLYQYNYHPAAYAY
AYPHYAYQQYHQYPYAANPATYYGPCPQHYPPQTFGDQSPDACTIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p050203



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS4D02G094100.1
Unrepresented genome(s):
TRITU_Svevo_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU4Hr1G017350.2 orthology 0.165 1 546 3.19e-196
tritu_pan_p015423 ultra-paralogy 0.0853 0 - -
tritu_pan_p018895 ultra-paralogy 0.072 0 - -