Gene tritu_pan_p053420


Sequence ID tritu_pan_p053420  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 155aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 155 amino acids

>tritu_pan_p053420_TRITU
MAAAGPVVLQTDVHCLECARKIRNAVGNQLGVERVWASPDTGLVVVAGTADPAALRRRIR
RKMRRPVAILSDGSTPYAGPGPTTPHWHYGTGDAPPSSVPPYGWGTAPPPHAYYSYPPPP
PPPPSPAGYPYGGWASDPDPYGYGTRTTVPTCSIL




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP245789 Unannotated cluster
3 GP349846 Unannotated cluster
4 GP475099 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p053420



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS5D02G506300.1
Unrepresented genome(s):
TRITU_Svevo_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA10G0100300.1 orthology 1 2 - -
cocnu_pan_p026708 orthology 0.986 2 - -
orysa_pan_p015511 orthology 1 2 - -
orysa_pan_p051500 orthology 1 1 - -