Gene vitvi_pan_p017163


Sequence ID vitvi_pan_p017163  add to my list
Species Vitis vinifera
Alias No gene alias
Pangenome status Specific (1/3)
Length 112aa



Length: 112 amino acids

>vitvi_pan_p017163_VITVI
MYRPISRLRSKEEIGSVAWHVGGDLGSCFSLDMATKYIISAVLGSFAVAYACDFLTSDKK
IFGGTTPKTVANKEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKSQSES




Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP072479 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Protein of unknown function DUF1138
IPR009515 		Protein of unknown function DUF1138 Family

IPR009515
Figure 1: IPR domains for vitvi_pan_p017163



Represented sequence(s):
VITVI_CabernetSauvignon_v1.0
VvCabSauv08_H0001F_023.ver1.0.g010140.m04
VvCabSauv08_P0001F.ver1.0.g266510.m07
Unrepresented genome(s):
VITVI_12X.2
VITVI_Carmenere_v1.0
Download sequences FASTA

  1. 2.
1. VvCabSauv08_H0001F_023.ver1.0.g010140.m04 0.00 0.90
2. VvCabSauv08_P0001F.ver1.0.g266510.m07 0.90 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Bv_004250_qxzd.t1 orthology 0.419 3 - -
Cc06_g16730 orthology 0.418 4 - -
FvH4_6g23630.1 orthology 0.352 3 - -
Oeu008921.2 orthology 0.585 4 - -
Oeu017948.1 orthology 0.575 4 - -
ipotf_pan_p004891 orthology 0.818 3 - -
ipotf_pan_p031007 orthology 0.617 4 - -
itb15g03700.t1 orthology 0.617 4 - -
maldo_pan_p043115 orthology 0.366 3 - -
thecc_pan_p013986 orthology 0.281 2 - -
vitvi_pan_p004955 ultra-paralogy 0.0083 0 - -
vitvi_pan_p018667 ultra-paralogy 0.0024 0 - -
vitvi_pan_p036875 ultra-paralogy 0.016 0 - -