Gene vitvi_pan_p027751
| Sequence ID | vitvi_pan_p027751 add to my list | ||
|---|---|---|---|
| Species | Vitis vinifera | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 155aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 155 amino acids
>vitvi_pan_p027751_VITVI MGALDHVSHLFDCSHGHSKLKRRKQLQTVEIKVKMDCEGCERKVRRAVEGMKGVTQVDVV PKHHKLTVVGYVDPAKVVSRVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPPGYVRN AYEDPQYSHLARASSTEVRYTTAFSDENPAACAIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP040065 | Unannotated cluster |
| 4 | GP463617 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for vitvi_pan_p027751
Represented sequence(s):
VITVI_CabernetSauvignon_v1.0
VITVI_Carmenere_v1.0
VITVI_12X.2
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. Vitvi03g00148.t01 | 0.00 | 0.65 | 0.65 | 0.65 | 0.65 |
| 2. VvCabSauv08_H0007F_043.ver1.0.g067780.m01 | 0.65 | 0.00 | -0.00 | -0.00 | -0.00 |
| 3. VvCabSauv08_P0007F.ver1.0.g308390.m01 | 0.65 | -0.00 | 0.00 | -0.00 | -0.00 |
| 4. VvCarFPS02VCR702_v1_Hc0026F_008.ver1_0.g482030.m01 | 0.65 | -0.00 | -0.00 | 0.00 | -0.00 |
| 5. VvCarFPS02VCR702_v1_PsGc_243.ver1_0.g124120.m01 | 0.65 | -0.00 | -0.00 | -0.00 | 0.00 |