GreenPhyl V4 Families
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Level
Creation date
Last update (desc)
Number of clusters: 11883
Family Id | Family Name | Number of sequences | Access | Owner | |
---|---|---|---|---|---|
SNF2/RAD54 helicase superfamily [OBSOLETE]
GP000076_V4
|
SNF2/RAD54 helicase superfamily | 2782 | public - read only | greenphyl_v4 | |
(plant-specificity: 86%) [OBSOLETE]
GP000038_V4
|
Unannotated cluster | 2846 | public - read only | greenphyl_v4 | |
Transcription factor bHLH family (plant-specificity: 100%) [OBSOLETE]
GP000618_V4
|
Transcription factor bHLH family | 2684 | public - read only | greenphyl_v4 | |
GP000053_V4 | Unannotated cluster | 2564 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000069_V4
|
Unannotated cluster | 2854 | public - read only | greenphyl_v4 | |
Calcium-binding EF-hand calmodulin family [OBSOLETE]
GP000056_V4
|
Calcium-binding EF-hand calmodulin family | 2410 | public - read only | greenphyl_v4 | |
Peptidase S10, serine carboxypeptidase family [OBSOLETE]
GP000047_V4
|
Peptidase S10, serine carboxypeptidase family | 2325 | public - read only | greenphyl_v4 | |
(plant-specificity: 19%) [OBSOLETE]
GP000051_V4
|
Unannotated cluster | 2333 | public - read only | greenphyl_v4 | |
(plant-specificity: 30%) [OBSOLETE]
GP000057_V4
|
Unannotated cluster | 2412 | public - read only | greenphyl_v4 | |
GRAS transcription factor family [OBSOLETE]
GP000046_V4
|
GRAS transcription factor family | 2277 | public - read only | greenphyl_v4 | |
GP000055_V4 | Unannotated cluster | 2290 | public - read only | greenphyl_v4 | |
(plant-specificity: 76%) [OBSOLETE]
GP000061_V4
|
Unannotated cluster | 2285 | public - read only | greenphyl_v4 | |
Multicopper oxidase family [OBSOLETE]
GP000100_V4
|
Multicopper oxidase family | 2169 | public - read only | greenphyl_v4 | |
Signal transduction superfamily (plant-specificity: 60%) [OBSOLETE]
GP000129_V4
|
Signal transduction superfamily | 2217 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000060_V4
|
Unannotated cluster | 2164 | public - read only | greenphyl_v4 | |
GP000087_V4 | Unannotated cluster | 2158 | public - read only | greenphyl_v4 | |
AMP-dependent synthetase/ligase superfamily [OBSOLETE]
GP000118_V4
|
AMP-dependent synthetase/ligase superfamily | 2082 | public - read only | greenphyl_v4 | |
Cyclin-dependent kinase family (plant-specificity: 30%) [OBSOLETE]
GP000032_V4
|
Cyclin-dependent kinase family | 1994 | public - read only | greenphyl_v4 | |
Glutathione S-transferase superfamily [OBSOLETE]
GP000091_V4
|
Glutathione S-transferase superfamily | 2067 | public - read only | greenphyl_v4 | |
Heavy metal transport/detoxification protein superfamily (plant-specificity: 90%) [OBSOLETE]
GP000323_V4
|
Heavy metal transport/detoxification protein superfamily | 2115 | public - read only | greenphyl_v4 | |
(plant-specificity: 99%) [OBSOLETE]
GP000168_V4
|
Unannotated cluster | 2078 | public - read only | greenphyl_v4 | |
(plant-specificity: 19%) [OBSOLETE]
GP000107_V4
|
Unannotated cluster | 2033 | public - read only | greenphyl_v4 | |
(plant-specificity: 50%) [OBSOLETE]
GP000148_V4
|
Unannotated cluster | 2061 | public - read only | greenphyl_v4 | |
GP000199_V4 | Unannotated cluster | 2069 | public - read only | greenphyl_v4 | |
(plant-specificity: 19%) [OBSOLETE]
GP000310_V4
|
Unannotated cluster | 2042 | public - read only | greenphyl_v4 | |
C2C2 transcription factor family (plant-specificity: 85%) [OBSOLETE]
GP000150_V4
|
C2C2 transcription factor family | 1938 | public - read only | greenphyl_v4 | |
F-box related group (plant-specificity: 30%) [OBSOLETE]
GP000059_V4
|
F-box related group | 2135 | public - read only | greenphyl_v4 | |
(plant-specificity: 100%) [OBSOLETE]
GP011351_V4
|
Unannotated cluster | 1963 | public - read only | greenphyl_v4 | |
GP104211_V4 | Unannotated cluster | 1887 | public - read only | greenphyl_v4 | |
MYB family transcription factor Group3 SHAQKYF (plant-specificity: 30%) [OBSOLETE]
GP000128_V4
|
MYB family transcription factor Group3 SHAQKYF | 1885 | public - read only | greenphyl_v4 | |
Cinnamoyl CoA reductase-like / Dihydroflavonol-4-reductase family [OBSOLETE]
GP000074_V4
|
Cinnamoyl CoA reductase-like / Dihydroflavonol-4-reductase family | 1899 | public - read only | greenphyl_v4 | |
Papain superfamily [OBSOLETE]
GP000067_V4
|
Papain superfamily | 1891 | public - read only | greenphyl_v4 | |
(plant-specificity: 60%) [OBSOLETE]
GP000173_V4
|
Unannotated cluster | 1921 | public - read only | greenphyl_v4 | |
Pollen allergen/expansin superfamily (plant-specificity: 30%) [OBSOLETE]
GP000070_V4
|
Pollen allergen/expansin superfamily | 1833 | public - read only | greenphyl_v4 | |
ATPase transporter family [OBSOLETE]
GP000131_V4
|
ATPase transporter family | 1851 | public - read only | greenphyl_v4 | |
Terpene synthase superfamily (plant-specificity: 91%) [OBSOLETE]
GP000072_V4
|
Terpene synthase superfamily | 1859 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000167_V4
|
Unannotated cluster | 1874 | public - read only | greenphyl_v4 | |
(plant-specificity: 100%) [OBSOLETE]
GP001207_V4
|
Unannotated cluster | 1984 | public - read only | greenphyl_v4 | |
Phytocyanin family (plant-specificity: 99%) [OBSOLETE]
GP000068_V4
|
Phytocyanin family | 1822 | public - read only | greenphyl_v4 | |
GP000065_V4 | Unannotated cluster | 1818 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000078_V4
|
Unannotated cluster | 1843 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000228_V4
|
Unannotated cluster | 1825 | public - read only | greenphyl_v4 | |
Expressed or hypothetical protein group (plant-specificity: 98%) [OBSOLETE]
GP000714_V4
|
Expressed or hypothetical protein group | 1791 | public - read only | greenphyl_v4 | |
AS2 transcription factor family (plant-specificity: 100%) [OBSOLETE]
GP000088_V4
|
AS2 transcription factor family | 1720 | public - read only | greenphyl_v4 | |
Major Intrinsic family (MIP) [OBSOLETE]
GP000156_V4
|
Major Intrinsic family (MIP) | 1726 | public - read only | greenphyl_v4 | |
(plant-specificity: 9%) [OBSOLETE]
GP000112_V4
|
Unannotated cluster | 1698 | public - read only | greenphyl_v4 | |
(plant-specificity: 96%) [OBSOLETE]
GP005390_V4
|
Unannotated cluster | 1672 | public - read only | greenphyl_v4 | |
Unknown function duf247 superfamily (plant-specificity: 100%) [OBSOLETE]
GP000086_V4
|
Unknown function duf247 superfamily | 1674 | public - read only | greenphyl_v4 | |
Cellulose synthase family (plant-specificity: 40%) [OBSOLETE]
GP000073_V4
|
Cellulose synthase family | 1637 | public - read only | greenphyl_v4 | |
Heat shock protein (plant-specificity: 9%) [OBSOLETE]
GP000133_V4
|
Heat shock protein | 1668 | public - read only | greenphyl_v4 |