Family GP000588_V3
Family ID |
Zinc finger (C3HC4-type RING finger) / von Willebrand factor type A family (plant-specificity: 9%) [OBSOLETE]
GP000588_V3 OBSOLETE
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Family name | Zinc finger (C3HC4-type RING finger) / von Willebrand factor type A family |
Creation date | (last update: 2016-09-27 12:10:04) |
Level | 1 |
Owner | greenphyl_v3 |
Evidence | N/A |
Access | public - read only |
Family description / comments | Paper:Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. |
Sequences | 233 |
Sequence total: 233
Species | Sequence Count |
---|---|
7 | |
33 | |
7 | |
30 | |
10 | |
20 | |
14 | |
14 | |
9 | |
6 | |
5 | |
8 | |
36 | |
6 | |
6 | |
2 | |
4 | |
13 | |
3 |
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Alignment and filtration statistics:
Overall family sequences | Sequences used for alignment (w/o splice) | Sequences kept after filtration | [min; median; max] ~average sequence length | Alignment length | Masked alignment length |
---|---|---|---|---|---|
233 | 211 (91%) | 211 (91%) | [55; 612; 1195] ~560 | 137 | 137 |
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Alignment and filtration statistics:
Overall family sequences | Sequences used for alignment (w/o splice) | Sequences kept after filtration | [min; median; max] ~average sequence length | Alignment length | Masked alignment length |
---|---|---|---|---|---|
233 | 211 (91%) | 211 (91%) | [55; 612; 1195] ~560 | 137 | 137 |