Family GP000726
Family ID
GP000726
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Family name
RNA polymerase sigma factor, plastid SigB/SigC/SigD types family
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Synonym(s)
Sigma70-like transcription factor
Cross-reference(s)
PMID:
Plastidic RNA polymerase sigma factors in Arabidopsis.
10555304
Curation status ?
Taxonomic coverage
Gene tree
Family level
1
Sequence total: 447
Species | Sequence Count |
---|---|
8 | |
5 | |
7 | |
13 | |
16 | |
12 | |
10 | |
7 | |
9 | |
10 | |
10 | |
6 | |
18 | |
6 | |
8 | |
22 | |
7 | |
5 | |
6 | |
8 | |
5 | |
17 | |
6 | |
13 | |
10 | |
8 | |
9 | |
9 | |
15 | |
8 | |
8 | |
17 | |
8 | |
11 | |
6 | |
6 | |
9 | |
12 | |
21 | |
8 | |
9 | |
8 | |
5 | |
8 | |
7 | |
11 |
InterPro family
Other InterPro signatures
IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
RNA polymerase sigma-70
IPR000943
|
RNA polymerase sigma-70 | Domain | 88 | (393) | No |
RNA polymerase sigma-70 region 3
IPR007624
|
RNA polymerase sigma-70 region 3 | Domain | 82 | (365) | No |
RNA polymerase sigma-70 region 2
IPR007627
|
RNA polymerase sigma-70 region 2 | Domain | 88 | (393) | No |
RNA polymerase sigma-70 region 4
IPR007630
|
RNA polymerase sigma-70 region 4 | Domain | 87 | (388) | No |
RNA polymerase sigma factor, region 3/4-like
IPR013324
|
RNA polymerase sigma factor, region 3/4-like | Homologous_superfamily | 89 | (399) | No |
RNA polymerase sigma factor, region 2
IPR013325
|
RNA polymerase sigma factor, region 2 | Homologous_superfamily | 91 | (408) | No |
RNA polymerase sigma-70 like domain
IPR014284
|
RNA polymerase sigma-70 like domain | Domain | 89 | (396) | No |
Winged helix-like DNA-binding domain superfamily
IPR036388
|
Winged helix-like DNA-binding domain superfamily | Homologous_superfamily | 90 | (401) | No |
Representative InterPro domains - Consensus schema
Domain architecture
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