Family GP001785_V3


Family ID
ARID/BRIGHT DNA-binding superfamily (plant-specificity: 100%) [OBSOLETE]
GP001785_V3 OBSOLETE  add to my list
Family name ARID/BRIGHT DNA-binding superfamily
Creation date (last update: 2016-09-27 12:27:14)
Level 1
Type superfamily
Owner greenphyl_v3
Evidence IEA:InterPro
Access public - read only
Family description / comments
Sequences 75
Associated GPv4 family
ARID/BRIGHT DNA-binding superfamily (plant-specificity: 60%)
GP001785




Level Family ID (number of sequences)
1 GP001785_V3 (75)
2
ARID/BRIGHT DNA-binding with HSP20 domain containing family (plant-specificity: 100%) [OBSOLETE]
GP017075_V3 (75)
3
(plant-specificity: 100%) [OBSOLETE]
GP041722_V3 (75)
4
(plant-specificity: 100%) [OBSOLETE]
GP071127_V3 (75)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 75
Species Count (w/o splice) Count (w/ splice)
2 2
1 1
3 3
6 6
2 4
2 3
5 10
2 3
2 2
3 3
2 2
3 3
6 7
3 3
5 5
1 1
7 7
2 2
6 8


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
75 63 (84%) 63 (84%) [71; 480; 907] ~469 264 264