Family GP004136_V3


Family ID
Zinc finger, U1-C type domain containing family [OBSOLETE]
GP004136_V3 OBSOLETE  add to my list
Family name Zinc finger, U1-C type domain containing family
Creation date (last update: 2016-09-27 12:57:53)
Level 1
Type family
Owner greenphyl_v3
Evidence IEA:InterPro
Access public - read only
Family description / comments
Sequences 28
Associated GPv4 family
Zinc finger, U1-C type domain containing family
GP004136




Level Family ID (number of sequences)
1 GP004136_V3 (28)
2 GP021241_V3 (28)
3 GP046316_V3 (28)
4 GP076011_V3 (28)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 28
Species Count (w/o splice) Count (w/ splice)
1 1
1 1
2 2
1 1
1 1
1 1
1 1
1 4
2 2
1 1
1 1
1 1
1 1
1 1
3 3
1 1
2 2
2 3


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
28 24 (86%) 24 (86%) [72; 211; 421] ~232 109 109