Family GP000748_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP000748_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 12:12:22)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 191
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 100%)
GP000748




Level Family ID (number of sequences)
1 GP000748_V3 (191)
2
(plant-specificity: 100%) [OBSOLETE]
GP015953_V3 (143)
(plant-specificity: 100%) [OBSOLETE]
GP018228_V3 (48)
3
(plant-specificity: 100%) [OBSOLETE]
GP041411_V3 (85)
(plant-specificity: 100%) [OBSOLETE]
GP043747_V3 (41)
(plant-specificity: 100%) [OBSOLETE]
GP048347_V3 (17)
(plant-specificity: 100%) [OBSOLETE]
GP043002_V3 (48)
4
(plant-specificity: 100%) [OBSOLETE]
GP070902_V3 (81)
(plant-specificity: 100%) [OBSOLETE]
GP072783_V3 (45) GP072783_V3 (45)
(plant-specificity: 100%) [OBSOLETE]
GP078365_V3 (17)
(plant-specificity: 100%) [OBSOLETE]
GP072503_V3 (48)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 191
Species Count (w/o splice) Count (w/ splice)
6 6
3 3
13 13
6 6
12 12
8 8
11 16
10 10
7 7
9 9
6 6
7 7
13 13
7 7
10 10
7 10
22 22
6 6
17 20


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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
191 177 (93%) 177 (93%) [64; 594; 1158] ~530 107 107