GreenPhyl V1 Families
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Number of clusters: 5736
Family Id | Family Name | Number of sequences | Access | Owner | |
---|---|---|---|---|---|
Disease resistance protein (CC-NBS-LRR class) group4. Only ORYZA [OBSOLETE]
GPV1_2195_4
|
Disease resistance protein (CC-NBS-LRR class) group4. Only ORYZA | 5 | public - read only | greenphyl_v1 | |
DNA helicase [OBSOLETE]
GPV1_3154_4
|
DNA helicase | 4 | public - read only | greenphyl_v1 | |
DUF26 +KD (ex group 3) [OBSOLETE]
GPV1_6121_4
|
DUF26 +KD (ex group 3) | 109 | public - read only | greenphyl_v1 | |
Elongation factor 1-alpha / EF-1 family [OBSOLETE]
GPV1_379_4
|
Elongation factor 1-alpha / EF-1 family | 23 | public - read only | greenphyl_v1 | |
Elongation factor EF-Tu family [OBSOLETE]
GPV1_3183_4
|
Elongation factor EF-Tu family | 5 | public - read only | greenphyl_v1 | |
ER 2-Lysophosphatidate Acyltransferase [OBSOLETE]
GPV1_4825_4
|
ER 2-Lysophosphatidate Acyltransferase | 3 | public - read only | greenphyl_v1 | |
ER2-Lysophosphatidate Acyltransferase [OBSOLETE]
GPV1_1713_4
|
ER2-Lysophosphatidate Acyltransferase | 7 | public - read only | greenphyl_v1 | |
ERF subfamily 1 [OBSOLETE]
GPV1_34_4
|
ERF subfamily 1 | 200 | public - read only | greenphyl_v1 | |
ERF subfamily 2 (DREB) [OBSOLETE]
GPV1_164_4
|
ERF subfamily 2 (DREB) | 44 | public - read only | greenphyl_v1 | |
ERF subfamily 3 (DREB) [OBSOLETE]
GPV1_1248_4
|
ERF subfamily 3 (DREB) | 8 | public - read only | greenphyl_v1 | |
ERF subfamily 4. Only ARATH [OBSOLETE]
GPV1_3820_4
|
ERF subfamily 4. Only ARATH | 3 | public - read only | greenphyl_v1 | |
Expansin-Like family A [OBSOLETE]
GPV1_1030_4
|
Expansin-Like family A | 10 | public - read only | greenphyl_v1 | |
Expressed or hypothetical protein group. Only ORYZA [OBSOLETE]
GPV1_2781_4
|
Expressed or hypothetical protein group. Only ORYZA | 4 | public - read only | greenphyl_v1 | |
Extensin (ex group 3) [OBSOLETE]
GPV1_6116_4
|
Extensin (ex group 3) | 15 | public - read only | greenphyl_v1 | |
Flagellar calcium-binding family (calflagin) [OBSOLETE]
GPV1_5739_4
|
Flagellar calcium-binding family (calflagin) | 12 | public - read only | greenphyl_v1 | |
FtsH family [OBSOLETE]
GPV1_259_4
|
FtsH family | 35 | public - read only | greenphyl_v1 | |
GDSL-motif lipase/hydrolase subfamily 1 [OBSOLETE]
GPV1_46_4
|
GDSL-motif lipase/hydrolase subfamily 1 | 144 | public - read only | greenphyl_v1 | |
GDSL-motif lipase/hydrolase subfamily 2 [OBSOLETE]
GPV1_73_4
|
GDSL-motif lipase/hydrolase subfamily 2 | 106 | public - read only | greenphyl_v1 | |
Glutaredoxin 3 subfamily [OBSOLETE]
GPV1_2263_4
|
Glutaredoxin 3 subfamily | 4 | public - read only | greenphyl_v1 | |
Glyceraldehyde-3-phosphate dehydrogenase (NADP) [OBSOLETE]
GPV1_4975_4
|
Glyceraldehyde-3-phosphate dehydrogenase (NADP) | 4 | public - read only | greenphyl_v1 | |
Glycoside Hydrolase family 31 subfamily 1 Alpha-glucosidase [OBSOLETE]
GPV1_1414_4
|
Glycoside Hydrolase family 31 subfamily 1 Alpha-glucosidase | 8 | public - read only | greenphyl_v1 | |
Glycoside Hydrolase family 31 subfamily 2 contains IPR000294 [OBSOLETE]
GPV1_4899_4
|
Glycoside Hydrolase family 31 subfamily 2 contains IPR000294 | 3 | public - read only | greenphyl_v1 | |
Glycosyl hydrolase family 17 subfamily 1 [OBSOLETE]
GPV1_44_4
|
Glycosyl hydrolase family 17 subfamily 1 | 84 | public - read only | greenphyl_v1 | |
Glycosyl hydrolase family 17 subfamily 2 [OBSOLETE]
GPV1_342_4
|
Glycosyl hydrolase family 17 subfamily 2 | 53 | public - read only | greenphyl_v1 | |
Homeobox-leucine zipper subfamily 3 with Start Domain [OBSOLETE]
GPV1_706_4
|
Homeobox-leucine zipper subfamily 3 with Start Domain | 13 | public - read only | greenphyl_v1 | |
Hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyltransferase family (HTC) [OBSOLETE]
GPV1_1889_4
|
Hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyltransferase family (HTC) | 8 | public - read only | greenphyl_v1 | |
Hydroxyproline-rich glycofamily [OBSOLETE]
GPV1_1953_4
|
Hydroxyproline-rich glycofamily | 6 | public - read only | greenphyl_v1 | |
Ketoacyl-ACP Reductase family [OBSOLETE]
GPV1_976_4
|
Ketoacyl-ACP Reductase family | 11 | public - read only | greenphyl_v1 | |
Kinase + LRR group. [OBSOLETE]
GPV1_828_4
|
Kinase + LRR group. | 13 | public - read only | greenphyl_v1 | |
Kinase group 10 . Only ARATH [OBSOLETE]
GPV1_1909_4
|
Kinase group 10 . Only ARATH | 6 | public - read only | greenphyl_v1 | |
L-LEC (ex group 3) [OBSOLETE]
GPV1_6115_4
|
L-LEC (ex group 3) | 9 | public - read only | greenphyl_v1 | |
Large subunit ribosomal protein L13 family [OBSOLETE]
GPV1_1852_4
|
Large subunit ribosomal protein L13 family | 9 | public - read only | greenphyl_v1 | |
LAS/SCR/SHR subfamily [OBSOLETE]
GPV1_153_4
|
LAS/SCR/SHR subfamily | 48 | public - read only | greenphyl_v1 | |
Lectin family Only ARATH [OBSOLETE]
GPV1_2021_4
|
Lectin family Only ARATH | 6 | public - read only | greenphyl_v1 | |
Lectin protein kinase family [OBSOLETE]
GPV1_47_4
|
Lectin protein kinase family | 143 | public - read only | greenphyl_v1 | |
Light-harvesting complex II chlorophyll a/b binding protein 4 [OBSOLETE]
GPV1_2444_4
|
Light-harvesting complex II chlorophyll a/b binding protein 4 | 6 | public - read only | greenphyl_v1 | |
Long-chain-fatty-acid--CoA ligase family [OBSOLETE]
GPV1_311_4
|
Long-chain-fatty-acid--CoA ligase family | 28 | public - read only | greenphyl_v1 | |
LRK10L-2 (ex group 3) [OBSOLETE]
GPV1_6108_4
|
LRK10L-2 (ex group 3) | 16 | public - read only | greenphyl_v1 | |
LRR + KD (ex group 3) [OBSOLETE]
GPV1_6120_4
|
LRR + KD (ex group 3) | 172 | public - read only | greenphyl_v1 | |
LRR group 1-4: LRR+ KD (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_8_4
|
LRR group 1-4: LRR+ KD (ex subdivision group 9 level 3) | 353 | public - read only | greenphyl_v1 | |
LRR group 2-4: only LRR (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6106_4
|
LRR group 2-4: only LRR (ex subdivision group 9 level 3) | 296 | public - read only | greenphyl_v1 | |
LRR group 3-4: KD (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6105_4
|
LRR group 3-4: KD (ex subdivision group 9 level 3) | 15 | public - read only | greenphyl_v1 | |
LRR group 4-4 (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6104_4
|
LRR group 4-4 (ex subdivision group 9 level 3) | 30 | public - read only | greenphyl_v1 | |
LRR-RLK (mostly subgroup LRR III) [OBSOLETE]
GPV1_65_4
|
LRR-RLK (mostly subgroup LRR III) | 27 | public - read only | greenphyl_v1 | |
LRR-RLK (sous-group LRRIa and c) [OBSOLETE]
GPV1_59_4
|
LRR-RLK (sous-group LRRIa and c) | 117 | public - read only | greenphyl_v1 | |
LysM-I and M-II (ex group 3) [OBSOLETE]
GPV1_6113_4
|
LysM-I and M-II (ex group 3) | 20 | public - read only | greenphyl_v1 | |
Macrophage migration inhibitory factor family [OBSOLETE]
GPV1_1252_4
|
Macrophage migration inhibitory factor family | 9 | public - read only | greenphyl_v1 | |
MAP4K - STE20-PAK Like Protein Kinase [OBSOLETE]
GPV1_582_4
|
MAP4K - STE20-PAK Like Protein Kinase | 15 | public - read only | greenphyl_v1 | |
MAPKKK family ZIK subfamily [OBSOLETE]
GPV1_296_4
|
MAPKKK family ZIK subfamily | 29 | public - read only | greenphyl_v1 | |
Md-I Arabidopsis specific [OBSOLETE]
GPV1_4121_4
|
Md-I Arabidopsis specific | 3 | public - read only | greenphyl_v1 |