GreenPhyl V1 Families
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Last update (desc)
Number of clusters: 5552
Family Id | Family Name | Number of sequences | Access | Owner | |
---|---|---|---|---|---|
AUX/IAA transcription factor family [OBSOLETE]
GPV1_107_2
|
AUX/IAA transcription factor family | 82 | public - read only | greenphyl_v1 | |
C2C2 CONSTANS and B-Box like subgroup1 [OBSOLETE]
GPV1_108_2
|
C2C2 CONSTANS and B-Box like subgroup1 | 77 | public - read only | greenphyl_v1 | |
Prefoldin and/or KIP1 domain containing protein family [OBSOLETE]
GPV1_109_2
|
Prefoldin and/or KIP1 domain containing protein family | 70 | public - read only | greenphyl_v1 | |
Ankyrin repeat subfamily 1 [OBSOLETE]
GPV1_114_2
|
Ankyrin repeat subfamily 1 | 71 | public - read only | greenphyl_v1 | |
ARF transcription factor family [OBSOLETE]
GPV1_110_2
|
ARF transcription factor family | 79 | public - read only | greenphyl_v1 | |
LOB classI [OBSOLETE]
GPV1_112_2
|
LOB classI | 74 | public - read only | greenphyl_v1 | |
GPV1_111_2 | Unannotated cluster | 75 | public - read only | greenphyl_v1 | |
GPV1_113_2 | Unannotated cluster | 70 | public - read only | greenphyl_v1 | |
AGC Kinase Gene Families (with Phototropin group) [OBSOLETE]
GPV1_117_2
|
AGC Kinase Gene Families (with Phototropin group) | 78 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_118_2
|
Only ORYZA [Automatic annotation] | 1 | public - read only | greenphyl_v1 | |
Ubiquitin family [OBSOLETE]
GPV1_115_2
|
Ubiquitin family | 71 | public - read only | greenphyl_v1 | |
GPV1_116_2 | Unannotated cluster | 57 | public - read only | greenphyl_v1 | |
GPV1_119_2 | Unannotated cluster | 63 | public - read only | greenphyl_v1 | |
GPV1_120_2 | Unannotated cluster | 69 | public - read only | greenphyl_v1 | |
GPV1_121_2 | Unannotated cluster | 63 | public - read only | greenphyl_v1 | |
AAA-type ATPase subfamily 1 [OBSOLETE]
GPV1_129_2
|
AAA-type ATPase subfamily 1 | 61 | public - read only | greenphyl_v1 | |
Exo70 exocyst complex subunit group 1 [OBSOLETE]
GPV1_122_2
|
Exo70 exocyst complex subunit group 1 | 63 | public - read only | greenphyl_v1 | |
Homeobox-leucine zipper subfamily 1 [OBSOLETE]
GPV1_131_2
|
Homeobox-leucine zipper subfamily 1 | 67 | public - read only | greenphyl_v1 | |
Myrosinase-binding family [OBSOLETE]
GPV1_124_2
|
Myrosinase-binding family | 65 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_127_2
|
Only ORYZA [Automatic annotation] | 66 | public - read only | greenphyl_v1 | |
See at level 3 [OBSOLETE]
GPV1_130_2
|
See at level 3 | 63 | public - read only | greenphyl_v1 | |
GPV1_123_2 | Unannotated cluster | 69 | public - read only | greenphyl_v1 | |
GPV1_125_2 | Unannotated cluster | 66 | public - read only | greenphyl_v1 | |
GPV1_126_2 | Unannotated cluster | 64 | public - read only | greenphyl_v1 | |
GPV1_128_2 | Unannotated cluster | 63 | public - read only | greenphyl_v1 | |
Amino acid permease subfamily 1 [OBSOLETE]
GPV1_132_2
|
Amino acid permease subfamily 1 | 60 | public - read only | greenphyl_v1 | |
Ketoacyl-CoA Synthase family [OBSOLETE]
GPV1_136_2
|
Ketoacyl-CoA Synthase family | 56 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_133_2
|
Only ORYZA [Automatic annotation] | 53 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_138_2
|
Only ORYZA [Automatic annotation] | 3 | public - read only | greenphyl_v1 | |
GPV1_134_2 | Unannotated cluster | 56 | public - read only | greenphyl_v1 | |
GPV1_135_2 | Unannotated cluster | 28 | public - read only | greenphyl_v1 | |
ARF/SAR superfamily [OBSOLETE]
GPV1_143_2
|
ARF/SAR superfamily | 60 | public - read only | greenphyl_v1 | |
Lipid Transfer subfamily 1 [OBSOLETE]
GPV1_147_2
|
Lipid Transfer subfamily 1 | 49 | public - read only | greenphyl_v1 | |
NB-ARC domain containing family. Only ORYZA [OBSOLETE]
GPV1_139_2
|
NB-ARC domain containing family. Only ORYZA | 53 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_145_2
|
Only ORYZA [Automatic annotation] | 34 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_148_2
|
Only ORYZA [Automatic annotation] | 11 | public - read only | greenphyl_v1 | |
Phosphatase [OBSOLETE]
GPV1_141_2
|
Phosphatase | 58 | public - read only | greenphyl_v1 | |
Retrotransposon rice specific [OBSOLETE]
GPV1_144_2
|
Retrotransposon rice specific | 16 | public - read only | greenphyl_v1 | |
Ulp1 protease group1. Only ARATH [OBSOLETE]
GPV1_140_2
|
Ulp1 protease group1. Only ARATH | 55 | public - read only | greenphyl_v1 | |
GPV1_142_2 | Unannotated cluster | 54 | public - read only | greenphyl_v1 | |
GPV1_146_2 | Unannotated cluster | 54 | public - read only | greenphyl_v1 | |
GPV1_149_2 | Unannotated cluster | 57 | public - read only | greenphyl_v1 | |
AP2 family [OBSOLETE]
GPV1_154_2
|
AP2 family | 57 | public - read only | greenphyl_v1 | |
Laccase subfamily [OBSOLETE]
GPV1_155_2
|
Laccase subfamily | 53 | public - read only | greenphyl_v1 | |
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_153_2
|
Only ORYZA [Automatic annotation] | 23 | public - read only | greenphyl_v1 | |
Putative cation/hydrogen exchanger family [OBSOLETE]
GPV1_156_2
|
Putative cation/hydrogen exchanger family | 51 | public - read only | greenphyl_v1 | |
GPV1_151_2 | Unannotated cluster | 54 | public - read only | greenphyl_v1 | |
GPV1_152_2 | Unannotated cluster | 55 | public - read only | greenphyl_v1 | |
GPV1_157_2 | Unannotated cluster | 57 | public - read only | greenphyl_v1 | |
Unknown function DUF1677 subfamily 1. Only ORYZA [OBSOLETE]
GPV1_158_2
|
Unknown function DUF1677 subfamily 1. Only ORYZA | 53 | public - read only | greenphyl_v1 |