Family GP000026


Family ID
GP000026  add to my list
Family name
RNA recognition motif, RNP-1 superfamily   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 8187
Species Sequence Count
100
134
122
259
457
321
250
125
154
183
116
101
236
102
182
352
105
92
94
126
98
282
113
211
182
145
136
132
224
132
117
231
155
170
136
173
106
281
414
133
126
142
102
212
196
227




Close InterPro family
IPR Annotation Type % Occurence Specificity
RNA-binding motif protein 8
IPR008111 		RNA-binding motif protein 8 Family 1 (93) Yes
Pre-mRNA-splicing factor Cwc2/Slt11
IPR039171 		Pre-mRNA-splicing factor Cwc2/Slt11 Family 1 (73) Yes
TIPIN/Csm3/Swi3
IPR040038 		TIPIN/Csm3/Swi3 Family 1 (33) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
RNA recognition motif domain
IPR000504 		RNA recognition motif domain Domain 85 (6923) No
Nucleotide-binding alpha-beta plait domain superfamily
IPR012677 		Nucleotide-binding alpha-beta plait domain superfamily Homologous_superfamily 86 (7031) No
RNA-binding domain superfamily
IPR035979 		RNA-binding domain superfamily Homologous_superfamily 87 (7115) No

Close Representative InterPro domains - Consensus schema
IPR035979 IPR000504 IPR012677

Close Domain architecture
Clustering




Note: Alignment too large for online display.
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FASTA







Phylogeny tree not available.