Family GP002203


Family ID
GP002203  add to my list
Family name
Whirly transcription factor family   suggest a name
Synonym(s)
PBF-2-like
Cross-reference(s)
PMID:
Whirly transcription factors: defense gene regulation and beyond.
15708347 PMID:
PBF-2 is a novel single-stranded DNA binding factor implicated in PR-10a gene activation in potato.
10948264 PMID:
A new family of plant transcription factors displays a novel ssDNA-binding surface.
12080340
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 6319
Species Sequence Count
52
95
73
153
306
228
211
109
135
141
104
74
130
74
111
275
83
80
85
128
73
215
87
169
264
127
143
129
141
124
144
193
125
138
97
104
105
156
332
111
104
96
72
141
113
169




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Protein kinase domain
IPR000719 		Protein kinase domain Domain 88 (5589) No
Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR001245 		Serine-threonine/tyrosine-protein kinase, catalytic domain Domain 54 (3442) No
Serine/threonine-protein kinase, active site
IPR008271 		Serine/threonine-protein kinase, active site Active_site 58 (3674) No
Protein kinase-like domain superfamily
IPR011009 		Protein kinase-like domain superfamily Homologous_superfamily 92 (5839) No
Protein kinase, ATP binding site
IPR017441 		Protein kinase, ATP binding site Binding_site 62 (3945) No

Close Representative InterPro domains - Consensus schema
IPR011009 IPR000719 IPR001245 IPR008271 IPR017441

Close Domain architecture
Clustering




Note: Alignment too large for online display.
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FASTA







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