Family GP000090


Family ID
GP000090  add to my list
Family name
Aaa atpase superfamily   suggest a name
Cross-reference(s)
PMID:
[Structure, function and mechanisms of action of ATPases from the AAA superfamily of proteins]
17201069
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 3446
Species Sequence Count
54
48
51
92
118
97
78
59
119
96
47
52
79
51
77
216
63
53
58
54
53
96
58
88
100
76
58
46
101
52
74
120
56
84
42
43
45
84
160
61
52
44
47
88
73
83




Close InterPro family
IPR Annotation Type % Occurence Specificity
Heat shock protein HslU
IPR004491 		Heat shock protein HslU Family 1 (1) Yes
AAA ATPase, CDC48 family
IPR005938 		AAA ATPase, CDC48 family Family 6 (213) Yes
Protein of unknown function DUF2343
IPR018786 		Protein of unknown function DUF2343 Family 2 (63) Yes
Peroxisome biogenesis factor 1
IPR025653 		Peroxisome biogenesis factor 1 Family 1 (23) Yes
26S Proteasome regulatory subunit 7
IPR035245 		26S Proteasome regulatory subunit 7 Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
AAA+ ATPase domain
IPR003593 		AAA+ ATPase domain Domain 74 (2542) No
ATPase, AAA-type, core
IPR003959 		ATPase, AAA-type, core Domain 81 (2792) No
ATPase, AAA-type, conserved site
IPR003960 		ATPase, AAA-type, conserved site Conserved_site 61 (2116) No
P-loop containing nucleoside triphosphate hydrolase
IPR027417 		P-loop containing nucleoside triphosphate hydrolase Homologous_superfamily 83 (2850) No
AAA ATPase, AAA+ lid domain
IPR041569 		AAA ATPase, AAA+ lid domain Domain 61 (2113) No

Close Representative InterPro domains - Consensus schema
IPR027417 IPR003959 IPR003960 IPR041569 IPR003593

Close Domain architecture
Clustering




Note: Alignment too large for online display.
Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)