Family GP000046


Family ID
GP000046  add to my list
Family name
GRAS transcription factor family   suggest a name
Cross-reference(s)
PMID:
The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes.
10341448
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 3206
Species Sequence Count
47
34
28
66
86
58
60
60
67
50
48
51
56
44
65
161
54
37
37
75
20
74
50
114
104
65
82
73
92
78
70
77
56
97
62
75
55
67
190
52
59
84
44
93
81
108




Close InterPro family
IPR Annotation Type % Occurence Specificity
Scarecrow-like protein 3
IPR030008 		Scarecrow-like protein 3 Family 2 (52) Yes
Scarecrow-like protein 1
IPR030011 		Scarecrow-like protein 1 Family 1 (35) Yes
Scarecrow-like protein 8
IPR030013 		Scarecrow-like protein 8 Family 1 (43) Yes
Scarecrow-like protein 29/nodulation signalling pathway 1
IPR030015 		Scarecrow-like protein 29/nodulation signalling pathway 1 Family 1 (36) Yes
Scarecrow-like protein 18
IPR030017 		Scarecrow-like protein 18 Family 1 (42) Yes
Chitin-inducible gibberellin-responsive protein 2
IPR030018 		Chitin-inducible gibberellin-responsive protein 2 Family 1 (5) Yes
Protein short-root
IPR030019 		Protein short-root Family 1 (32) Yes
Scarecrow-like protein 26/nodulation signalling pathway 2
IPR030028 		Scarecrow-like protein 26/nodulation signalling pathway 2 Family 1 (33) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Transcription factor GRAS
IPR005202 		Transcription factor GRAS Domain 95 (3040) No

Close Representative InterPro domains - Consensus schema
IPR005202

Close Domain architecture
Clustering




Note: Alignment too large for online display.
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