Family GP000429


Family ID
GP000429  add to my list
Family name
Starch synthase family   suggest a name
Cross-reference(s)
PMID:
The map-based sequence of the rice genome.
16100779 PMID:
Nucleotide sequence of a long cDNA from the rice waxy gene.
1377969 PMID:
Nucleotide sequence of rice waxy gene.
2216792 PMID:
Use of alternate splice sites in granule-bound starch synthase mRNA from low-amylose rice varieties.
9747848 PMID:
Variation in the primary structure of waxy proteins (granule-bound starch synthase) in diploid cereals.
8595054 PMID:
Rapid isolation of a rice waxy sequence: a simple PCR method for the analysis of recombinant plasmids from intact Escherichia coli cells.
2016064 PMID:
Identification, cDNA cloning, and gene expression of soluble starch synthase in rice (Oryza sativa L.) immature seeds.
7518089 PMID:
Structure, organization and chromosomal location of the gene encoding a form of rice soluble starch synthase.
7610165 PMID:
Molecular cloning and expression analysis of three genes encoding starch synthase II in rice.
14740212 PMID:
Essential amino acids of starch synthase IIa differentiate amylopectin structure and starch quality between japonica and indica rice varieties.
16027975 PMID:
Granule-bound starch synthase: structure, function, and phylogenetic utility.
9866201 PMID:
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.
17210932 PMID:
Granule-bound starch synthase I. A major enzyme involved in the biogenesis of B-crystallites in starch granules.
12153578 PMID:
Circadian clock regulation of starch metabolism establishes GBSSI as a major contributor to amylopectin synthesis in Chlamydomonas reinhardtii.
16844835 PMID:
Testicular atrophy in rats following epinephrine administration.
5272305
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 1652
Species Sequence Count
22
21
32
31
54
42
33
26
27
45
23
29
84
26
44
72
24
23
25
30
21
48
23
44
47
24
30
29
44
30
25
59
45
36
28
28
25
45
85
33
29
28
22
26
38
47




Close InterPro family
IPR Annotation Type % Occurence Specificity
Flagellar protein FlhE
IPR009420 		Flagellar protein FlhE Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Mitochondrial substrate/solute carrier
IPR018108 		Mitochondrial substrate/solute carrier Repeat 58 (966) No
Mitochondrial carrier domain superfamily
IPR023395 		Mitochondrial carrier domain superfamily Homologous_superfamily 59 (973) No

Close Representative InterPro domains - Consensus schema
IPR018108 IPR023395

Close Domain architecture
Clustering




Note: Alignment too large for online display.
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