Family GP001636


Family ID
GP001636  add to my list
Family name
Poly(A)-specific ribonuclease PARN family   suggest a name
Synonym(s)
Ribonuclease CAF1
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 807
Species Sequence Count
13
15
10
22
38
28
20
13
15
20
15
16
38
17
20
35
12
13
10
13
12
24
15
24
13
12
21
13
43
12
18
14
7
12
11
17
13
28
28
14
12
10
10
12
17
12




Close InterPro family
IPR Annotation Type % Occurence Specificity
rRNA small subunit methyltransferase B
IPR004573 		rRNA small subunit methyltransferase B Family 4 (30) Yes
Transcription factor TFIIH subunit p52/Tfb2
IPR004598 		Transcription factor TFIIH subunit p52/Tfb2 Family 11 (91) Yes
RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant
IPR023268 		RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant Family 7 (57) Yes
tRNA (C5-cytosine) methyltransferase, NCL1
IPR023270 		tRNA (C5-cytosine) methyltransferase, NCL1 Family 9 (76) Yes
RNA (C5-cytosine) methyltransferase, NOP2
IPR023273 		RNA (C5-cytosine) methyltransferase, NOP2 Family 9 (74) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
SAM-dependent methyltransferase RsmB/NOP2-type
IPR001678 		SAM-dependent methyltransferase RsmB/NOP2-type Domain 53 (426) No
S-adenosyl-L-methionine-dependent methyltransferase
IPR029063 		S-adenosyl-L-methionine-dependent methyltransferase Homologous_superfamily 53 (429) No

Close Representative InterPro domains - Consensus schema
IPR029063 IPR001678

Close Domain architecture
Clustering




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