Family GP001508


Family ID
GP001508  add to my list
Family name
Novel plant SNARE family   suggest a name
Cross-reference(s)
PMID:
NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE.
12068098
Comment
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 620
Species Sequence Count
6
8
5
12
28
20
20
8
9
11
9
9
19
7
13
19
7
9
9
13
6
23
5
17
13
18
10
10
17
8
10
23
13
14
11
14
8
36
38
7
7
11
5
23
7
25




Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema


Close Domain architecture
Clustering




Note: Alignment too large for online display.
Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)