Family GP000994


Family ID
GP000994  add to my list
Family name
Zinc finger, lateral root primordium type 1 family   suggest a name
Synonym(s)
Unknown function duf702
Cross-reference(s)
PMID:
LRP1, a gene expressed in lateral and adventitious root primordia of arabidopsis.
7647564
Curation status ?
Taxonomic coverage
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 512
Species Sequence Count
5
11
4
10
43
27
19
12
8
12
8
8
13
6
8
15
4
9
9
11
2
7
8
22
14
8
10
9
10
11
12
12
12
9
7
6
11
7
28
9
8
7
6
7
7
21




Close InterPro family
IPR Annotation Type % Occurence Specificity
SHI protein family
IPR007818
SHI protein family Family 39 (199) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
SHORT INTERNODES, C-terminal
IPR006511
SHORT INTERNODES, C-terminal Domain 73 (375) No

Close Representative InterPro domains - Consensus schema
IPR006511
Zinc finger, lateral root primordium type 1
IPR006510 IPR007818


Close Domain architecture
Clustering





Download alignment file: 






You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 





for (default: all):
Species


(click on the button above to get your homolog prediction list)