Family GP001668


Family ID
GP001668  add to my list
Family name
RING-type ubiquitin ligase family   suggest a name
Synonym(s)
E3 ubiquitin-protein ligase BAH1-like
Cross-reference(s)
PMID:
Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis.
15644464 PMID:
A mutation in NLA, which encodes a RING-type ubiquitin ligase, disrupts the adaptability of Arabidopsis to nitrogen limitation.
17355433 PMID:
BAH1/NLA, a RING-type ubiquitin E3 ligase, regulates the accumulation of salicylic acid and immune responses to pseudomonas syringae DC3000.
18753285
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 361
Species Sequence Count
4
4
6
7
13
13
10
5
10
9
6
7
11
7
9
11
7
4
6
4
7
14
5
9
13
9
6
6
16
5
8
12
9
9
4
4
5
15
13
6
6
6
5
6
5
5




Close InterPro family
IPR Annotation Type % Occurence Specificity
E3 ubiquitin-protein ligase BAH1
IPR033326 		E3 ubiquitin-protein ligase BAH1 Family 29 (103) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, RING-type
IPR001841 		Zinc finger, RING-type Domain 63 (229) No
Zinc finger, RING/FYVE/PHD-type
IPR013083 		Zinc finger, RING/FYVE/PHD-type Homologous_superfamily 65 (235) No
Zinc finger, RING-type, conserved site
IPR017907 		Zinc finger, RING-type, conserved site Conserved_site 52 (187) No

Close Representative InterPro domains - Consensus schema
IPR013083 IPR001841 IPR017907

Close Domain architecture
Clustering





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