Family GP003828


Family ID
GP003828  add to my list
Family name
Ubiquitin-fold modifier 1 family   suggest a name
Synonym(s)
Ubiquitin-like, ufm1
Cross-reference(s)
PMID:
Genetic structure of the mating-type locus of Chlamydomonas reinhardtii.
11805055 PMID:
U-box proteins as a new family of ubiquitin ligases.
12646216 PMID:
Ubiquitin and its kin: how close are the family ties?
10884686 PMID:
Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1.
16527251
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 409
Species Sequence Count
3
6
5
17
20
15
11
5
10
8
7
6
12
4
20
8
4
5
5
4
4
8
5
16
12
8
6
2
13
8
6
13
6
11
7
13
8
14
12
9
13
4
4
19
5
8




Close InterPro family
IPR Annotation Type % Occurence Specificity
Ubiquitin-fold modifier 1
IPR005375 		Ubiquitin-fold modifier 1 Family 23 (94) Yes
Cold shock, CspA
IPR012156 		Cold shock, CspA Family 6 (24) Yes
CspD, cold shock
IPR012751 		CspD, cold shock Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Cold-shock protein, DNA-binding
IPR002059 		Cold-shock protein, DNA-binding Domain 56 (229) No
Cold shock domain
IPR011129 		Cold shock domain Domain 53 (217) No
Nucleic acid-binding, OB-fold
IPR012340 		Nucleic acid-binding, OB-fold Homologous_superfamily 55 (225) No

Close Representative InterPro domains - Consensus schema
IPR012340 IPR002059 IPR011129
Cold-shock (CSD) domain
IPR019844

Close Domain architecture
Clustering





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