Family GP000999


Family ID
GP000999  add to my list
Family name
Squalene monooxygenase family   suggest a name
Synonym(s)
Squalene epoxidase
Cross-reference(s)
PMID:
An example of intron junctional sliding in the gene families encoding squalene monooxygenase homologues in Arabidopsis thaliana and Brassica napus.
10350086
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 296
Species Sequence Count
2
7
2
1
20
14
12
5
6
4
3
13
12
15
3
17
5
3
4
5
1
2
16
7
8
2
4
6
18
10
12
3
4
10
2
1
5
2
7
3
3
1
7
3
4
2




Close InterPro family
IPR Annotation Type % Occurence Specificity
Squalene monooxygenase
IPR040125 		Squalene monooxygenase Family 54 (160) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Squalene epoxidase
IPR013698 		Squalene epoxidase Domain 89 (263) No
FAD/NAD(P)-binding domain superfamily
IPR036188 		FAD/NAD(P)-binding domain superfamily Homologous_superfamily 87 (258) No

Close Representative InterPro domains - Consensus schema
IPR036188 IPR013698 IPR040125

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)