Family GP001773


Family ID
GP001773  add to my list
Family name
WD repeat-containing protein 68 family   suggest a name
Synonym(s)
GLABRA LWD
Cross-reference(s)
PMID:
Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering.
18676661 PMID:
A contradictory GLABRA3 allele helps define gene interactions controlling trichome development in Arabidopsis.
14561633 PMID:
The TRANSPARENT TESTA GLABRA1 locus, which regulates trichome differentiation and anthocyanin biosynthesis in Arabidopsis, encodes a WD40 repeat protein.
10402433
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 288
Species Sequence Count
4
4
4
3
18
16
9
4
4
7
3
3
6
3
5
31
5
3
3
5
1
6
4
5
8
3
6
5
9
7
4
6
6
5
3
3
4
7
14
5
6
5
4
3
9
10




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
WD40 repeat
IPR001680 		WD40 repeat Repeat 61 (176) No
WD40/YVTN repeat-like-containing domain superfamily
IPR015943 		WD40/YVTN repeat-like-containing domain superfamily Homologous_superfamily 62 (179) No
WD40-repeat-containing domain
IPR017986 		WD40-repeat-containing domain Domain 61 (175) No
WD40 repeat, conserved site
IPR019775 		WD40 repeat, conserved site Conserved_site 61 (175) No
WD40-repeat-containing domain superfamily
IPR036322 		WD40-repeat-containing domain superfamily Homologous_superfamily 63 (180) No

Close Representative InterPro domains - Consensus schema
IPR015943 IPR001680 IPR036322 IPR017986 IPR019775

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)