Family GP001622


Family ID
GP001622  add to my list
Family name
Ribosomal protein s12e family   suggest a name
Cross-reference(s)
PMID:
Atomic structures at last: the ribosome in 2000.
11297922
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 224
Species Sequence Count
1
2
1
2
13
9
9
9
15
4
3
1
1
1
5
9
2
2
2
3
1
7
3
6
4
2
3
3
8
4
4
10
4
3
2
2
3
6
11
8
9
4
2
2
13
6




Close InterPro family
IPR Annotation Type % Occurence Specificity
Ribosomal protein S12e
IPR000530 		Ribosomal protein S12e Family 79 (177) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR004038 		Ribosomal protein L7Ae/L30e/S12e/Gadd45 Domain 82 (184) No
50S ribosomal protein L30e-like
IPR029064 		50S ribosomal protein L30e-like Homologous_superfamily 87 (194) No

Close Representative InterPro domains - Consensus schema
IPR029064 IPR004038 IPR000530

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)