Family GP001488


Family ID
GP001488  add to my list
Family name
Afg1-like atpase family   suggest a name
Cross-reference(s)
PMID:
AFG1, a new member of the SEC18-NSF, PAS1, CDC48-VCP, TBP family of ATPases.
1441755
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 202
Species Sequence Count
2
3
2
15
5
5
4
2
3
5
2
7
15
3
3
15
4
6
2
3
1
9
2
2
6
2
2
2
5
2
2
5
3
3
2
2
2
8
13
2
2
3
2
3
4
7




Close InterPro family
IPR Annotation Type % Occurence Specificity
ATPase, AFG1-like
IPR005654 		ATPase, AFG1-like Family 94 (190) No
Cell division protein ZapE
IPR030870 		Cell division protein ZapE Family 2 (4) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
P-loop containing nucleoside triphosphate hydrolase
IPR027417 		P-loop containing nucleoside triphosphate hydrolase Homologous_superfamily 79 (160) No

Close Representative InterPro domains - Consensus schema
IPR027417 IPR005654

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)