Family GP150413


Family ID
GP150413  add to my list
Family name
Unannotated cluster   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 169
Species Sequence Count
2
2
3
3
3
3
3
2
3
4
2
2
4
4
2
9
2
2
2
2
8
4
2
4
3
5
4
4
9
2
7
5
2
3
2
2
3
6
7
4
1
2
3
3
3
12




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
WD40 repeat
IPR001680 		WD40 repeat Repeat 86 (146) No
WD40/YVTN repeat-like-containing domain superfamily
IPR015943 		WD40/YVTN repeat-like-containing domain superfamily Homologous_superfamily 85 (143) No
WD40-repeat-containing domain
IPR017986 		WD40-repeat-containing domain Domain 83 (141) No
WD40 repeat, conserved site
IPR019775 		WD40 repeat, conserved site Conserved_site 81 (137) No
G-protein beta WD-40 repeat
IPR020472 		G-protein beta WD-40 repeat Repeat 57 (96) No
WD40-repeat-containing domain superfamily
IPR036322 		WD40-repeat-containing domain superfamily Homologous_superfamily 85 (144) No

Close Representative InterPro domains - Consensus schema
IPR015943 IPR001680 IPR036322 IPR017986 IPR019775 IPR020472
TFIID subunit TAF5, NTD2 domain
IPR007582
TFIID subunit TAF5, NTD2 domain superfamily
IPR037264

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)