Family GP002894


Family ID
GP002894  add to my list
Family name
Ribophorin ii family   suggest a name
Cross-reference(s)
PMID:
Localization of ribophorin II to the endoplasmic reticulum involves both its transmembrane and cytoplasmic domains.
10826490
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 163
Species Sequence Count
1
2
4
2
10
9
5
3
5
3
4
2
5
1
4
7
2
3
2
1
2
2
2
4
4
2
3
4
4
4
3
4
4
1
2
2
6
7
8
2
2
3
2
2
4
5




Close InterPro family
IPR Annotation Type % Occurence Specificity
H/ACA ribonucleoprotein complex, subunit Nop10
IPR007264 		H/ACA ribonucleoprotein complex, subunit Nop10 Family 47 (76) Yes
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1
IPR008814 		Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1 Family 52 (84) No

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema
IPR008814 IPR007264
H/ACA ribonucleoprotein complex, subunit Nop10 superfamily
IPR036756

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)