Family GP002683


Family ID
GP002683  add to my list
Family name
Late embryogenesis abundant protein, group 5   suggest a name
Synonym(s)
Late embryogenesis abundant protein, group 1, Small hydrophilic plant seed protein family
Cross-reference(s)
PMID:
The enigmatic LEA proteins and other hydrophilins.
18772351
Comment
Late embryogenesis abundant protein, group 1 (Battaglia et al. 2008; Bies-Ethève et al. 2008))
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 153
Species Sequence Count
1
2
3
4
6
3
4
2
5
6
2
3
3
2
2
2
3
2
2
4
1
3
5
4
5
6
2
2
6
2
2
3
3
3
2
2
2
3
6
2
2
3
3
15
3
2




Close InterPro family
IPR Annotation Type % Occurence Specificity
Small hydrophilic plant seed protein
IPR000389 		Small hydrophilic plant seed protein Family 50 (76) Yes
Late embryogenesis abundant protein, LEA_5 subgroup
IPR038956 		Late embryogenesis abundant protein, LEA_5 subgroup Family 99 (151) No

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema
IPR000389 IPR038956
Small hydrophilic plant seed protein, conserved site
IPR022377

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)