Family GP002430


Family ID
GP002430  add to my list
Family name
Nonsense-mediated mRNA decay protein 3 family   suggest a name
Synonym(s)
NMD3
Cross-reference(s)
PMID:
NMD3 encodes an essential cytoplasmic protein required for stable 60S ribosomal subunits in Saccharomyces cerevisiae.
10022925
Curation status ?
Taxonomic coverage
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 146
Species Sequence Count
2
1
4
3
2
2
2
1
8
7
3
4
2
3
5
2
1
2
1
2
1
2
3
2
4
1
2
1
2
1
15
1
1
2
2
6
1
6
5
3
3
3
1
3
12
6




Close InterPro family
IPR Annotation Type % Occurence Specificity
Ribosomal export protein Nmd3
IPR039768
Ribosomal export protein Nmd3 Family 35 (51) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Nmd3, N-terminal
IPR007064
Nmd3, N-terminal Domain 64 (93) No

Close Representative InterPro domains - Consensus schema
IPR007064 IPR039768

Close Domain architecture
Clustering





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