Family GP001406


Family ID
GP001406  add to my list
Family name
Castor/Pollux ion channel family   suggest a name
Cross-reference(s)
PMID:
Antiquity and function of CASTOR and POLLUX, the twin ion channel-encoding genes key to the evolution of root symbioses in plants.
18978069 PMID:
Lotus japonicus CASTOR and POLLUX are ion channels essential for perinuclear calcium spiking in legume root endosymbiosis.
19106374
Comment
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 134
Species Sequence Count
2
1
2
2
2
1
1
3
12
1
2
9
2
2
6
2
2
2
1
2
4
2
5
3
2
2
2
4
2
2
3
3
2
2
2
2
9
4
5
2
2
2
2
4
5




Close InterPro family
IPR Annotation Type % Occurence Specificity
CASTOR/POLLUX/SYM8 ion channels
IPR010420 		CASTOR/POLLUX/SYM8 ion channels Family 76 (102) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
NAD(P)-binding domain superfamily
IPR036291 		NAD(P)-binding domain superfamily Homologous_superfamily 54 (72) No

Close Representative InterPro domains - Consensus schema
IPR036291 IPR010420

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)