Family GP003207


Family ID
GP003207  add to my list
Family name
Small ribonucleoprotein associated, SmB/SmN family   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 93
Species Sequence Count
1
2
1
2
5
3
4
1
1
4
1
1
3
1
1
3
1
1
1
1
1
2
1
2
2
2
2
2
5
2
2
3
1
3
1
1
2
2
3
2
2
3
1
1
5
2




Close InterPro family
IPR Annotation Type % Occurence Specificity
Small ribonucleoprotein associated, SmB/SmN
IPR017131 		Small ribonucleoprotein associated, SmB/SmN Family 70 (65) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
LSM domain, eukaryotic/archaea-type
IPR001163 		LSM domain, eukaryotic/archaea-type Domain 86 (80) No
LSM domain superfamily
IPR010920 		LSM domain superfamily Homologous_superfamily 88 (82) No

Close Representative InterPro domains - Consensus schema
IPR001163 IPR017131 IPR010920

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)