Family GP000234


Family ID
GP000234  add to my list
Family name
Oxygen-dependent FAD-linked oxidoreductase family   suggest a name
Synonym(s)
Reticuline oxidase precursor
Curation status ?
Taxonomic coverage
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 1755
Species Sequence Count
12
31
20
18
71
56
46
35
55
30
23
79
64
49
17
126
51
26
26
71
11
19
23
59
62
35
32
38
37
23
39
13
10
46
20
33
43
16
43
43
33
21
40
52
40
18




Close InterPro family
IPR Annotation Type % Occurence Specificity
Oestrogen receptor
IPR001292
Oestrogen receptor Family 1 (3) Yes
Putative rhamnosyl transferase
IPR021466
Putative rhamnosyl transferase Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
FAD linked oxidase, N-terminal
IPR006094
FAD linked oxidase, N-terminal Domain 71 (1242) No
Berberine/berberine-like
IPR012951
Berberine/berberine-like Domain 71 (1240) No
FAD-binding domain, PCMH-type
IPR016166
FAD-binding domain, PCMH-type Domain 69 (1207) No
FAD-binding, type PCMH, subdomain 1
IPR016167
FAD-binding, type PCMH, subdomain 1 Homologous_superfamily 67 (1170) No
FAD-binding, type PCMH-like superfamily
IPR036318
FAD-binding, type PCMH-like superfamily Homologous_superfamily 75 (1318) No

Close Representative InterPro domains - Consensus schema
IPR016167 IPR036318 IPR006094 IPR016166 IPR012951

Close Domain architecture
Clustering




Note: Alignment too large for online display.
Download alignment file: 






You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 





for (default: all):
Species


(click on the button above to get your homolog prediction list)