Family GP000583


Family ID
GP000583  add to my list
Family name
Signal recognition particle 54 kda family   suggest a name
Synonym(s)
Srp54
Curation status ?
Taxonomic coverage
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 447
Species Sequence Count
7
7
7
18
18
13
13
6
10
11
5
4
6
4
6
37
5
4
4
5
6
8
9
11
14
12
9
8
15
7
9
7
6
10
9
5
6
8
34
5
5
11
5
21
8
9




Close InterPro family
IPR Annotation Type % Occurence Specificity
Cell division protein FtsE, ATP-binding
IPR005286
Cell division protein FtsE, ATP-binding Family 1 (1) Yes
Signal recognition particle, SRP54 subunit, eukaryotic
IPR006325
Signal recognition particle, SRP54 subunit, eukaryotic Family 23 (104) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Signal recognition particle, SRP54 subunit, GTPase domain
IPR000897
Signal recognition particle, SRP54 subunit, GTPase domain Domain 89 (398) No
AAA+ ATPase domain
IPR003593
AAA+ ATPase domain Domain 69 (310) No
Signal recognition particle SRP54, helical bundle
IPR013822
Signal recognition particle SRP54, helical bundle Domain 77 (346) No
P-loop containing nucleoside triphosphate hydrolase
IPR027417
P-loop containing nucleoside triphosphate hydrolase Homologous_superfamily 87 (389) No
SRP/SRP receptor, N-terminal
IPR036225
SRP/SRP receptor, N-terminal Homologous_superfamily 67 (299) No
Signal recognition particle SRP54, N-terminal domain superfamily
IPR042101
Signal recognition particle SRP54, N-terminal domain superfamily Homologous_superfamily 84 (375) No

Close Representative InterPro domains - Consensus schema
IPR027417 IPR003593 IPR036225 IPR042101 IPR013822 IPR000897

Close Domain architecture
Clustering





Download alignment file: 






You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 





for (default: all):
Species


(click on the button above to get your homolog prediction list)