Family GP104319
Family ID
GP104319
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Family name
Phytochrome A/B/C/D/E
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Curation status ?
Taxonomic coverage
Gene tree
Family level
1
Sequence total: 302
| Species | Sequence Count |
|---|---|
| 6 | |
| 5 | |
| 3 | |
| 14 | |
| 10 | |
| 9 | |
| 8 | |
| 4 | |
| 10 | |
| 6 | |
| 4 | |
| 4 | |
| 6 | |
| 4 | |
| 4 | |
| 9 | |
| 3 | |
| 5 | |
| 6 | |
| 7 | |
| 4 | |
| 8 | |
| 5 | |
| 6 | |
| 12 | |
| 6 | |
| 6 | |
| 5 | |
| 10 | |
| 5 | |
| 3 | |
| 10 | |
| 5 | |
| 7 | |
| 3 | |
| 3 | |
| 4 | |
| 12 | |
| 14 | |
| 5 | |
| 5 | |
| 4 | |
| 4 | |
| 3 | |
| 13 | |
| 13 |
InterPro family
Other InterPro signatures
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
|
PAS domain
IPR000014
|
PAS domain | Domain | 82 | (248) | No |
|
GAF domain
IPR003018
|
GAF domain | Domain | 81 | (245) | No |
|
Histidine kinase/HSP90-like ATPase
IPR003594
|
Histidine kinase/HSP90-like ATPase | Domain | 73 | (221) | No |
|
Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR003661
|
Signal transduction histidine kinase, dimerisation/phosphoacceptor domain | Domain | 67 | (202) | No |
|
Histidine kinase domain
IPR005467
|
Histidine kinase domain | Domain | 76 | (229) | No |
|
Phytochrome, central region
IPR013515
|
Phytochrome, central region | Domain | 80 | (243) | No |
|
Phytochrome chromophore binding site
IPR013516
|
Phytochrome chromophore binding site | Binding_site | 70 | (211) | No |
|
PAS fold-2
IPR013654
|
PAS fold-2 | Domain | 81 | (244) | No |
|
PAS fold
IPR013767
|
PAS fold | Domain | 82 | (249) | No |
|
Phytochrome chromophore attachment domain
IPR016132
|
Phytochrome chromophore attachment domain | Domain | 83 | (250) | No |
|
GAF-like domain superfamily
IPR029016
|
GAF-like domain superfamily | Homologous_superfamily | 83 | (250) | No |
|
PAS domain superfamily
IPR035965
|
PAS domain superfamily | Homologous_superfamily | 85 | (256) | No |
|
Histidine kinase/HSP90-like ATPase superfamily
IPR036890
|
Histidine kinase/HSP90-like ATPase superfamily | Homologous_superfamily | 78 | (237) | No |
|
Phytochrome, PHY domain
IPR043150
|
Phytochrome, PHY domain | Homologous_superfamily | 80 | (242) | No |
Representative InterPro domains - Consensus schema
Domain architecture
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