Family GP002284


Family ID
GP002284  add to my list
Family name
Facilitates chromatin transcription complex subunit SPT16 family   suggest a name
Synonym(s)
Act complex subunit spt16p cdc68p
Cross-reference(s)
PMID:
The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome.
15546350 PMID:
The yeast FACT complex has a role in transcriptional initiation.
15987999 PMID:
Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: polymerase passage may degrade chromatin structure.
12524332 PMID:
FACT facilitates transcription-dependent nucleosome alteration.
12934006
Curation status ?
Taxonomic coverage
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 293
Species Sequence Count
8
4
8
12
9
5
5
6
9
6
3
3
8
3
4
15
4
3
4
8
3
7
4
6
6
11
12
11
11
6
3
4
3
5
4
5
5
12
11
6
6
5
4
5
7
4




Close InterPro family
IPR Annotation Type % Occurence Specificity
FACT complex subunit Spt16
IPR040258
FACT complex subunit Spt16 Family 30 (89) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema
FACT complex subunit Spt16 domain
IPR013953
FACT complex subunit Spt16, N-terminal lobe domain
IPR029148
FACT complex subunit Spt16, peptidase M24-like domain
IPR033825


Close Domain architecture
Clustering





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