Family GP004450


Family ID
GP004450  add to my list
Family name
kpsf/gutq family   suggest a name
Synonym(s)
Sugar isomerase
Cross-reference(s)
PMID:
Nucleotide sequence and expression of the gutQ gene within the glucitol operon of Escherichia coli.
2134185 PMID:
KpsF is the arabinose-5-phosphate isomerase required for 3-deoxy-D-manno-octulosonic acid biosynthesis and for both lipooligosaccharide assembly and capsular polysaccharide expression in Neisseria meningitidis.
11956197
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 75
Species Sequence Count
1
1
1
1
4
3
2
1
2
2
2
1
3
1
4
4
1
1
1
2
1
3
1
2
1
1
1
1
2
1
1
3
1
2
1
1
1
3
3
1
1
1
1
1
1
1




Close InterPro family
IPR Annotation Type % Occurence Specificity
Phosphosugar isomerase, KdsD/KpsF-type
IPR004800 		Phosphosugar isomerase, KdsD/KpsF-type Family 83 (62) Yes
KdsC family
IPR010023 		KdsC family Family 1 (1) Yes
Lipopolysaccharide assembly, LptC-related
IPR010664 		Lipopolysaccharide assembly, LptC-related Family 1 (1) Yes
Lipopolysaccharide export system protein LptC
IPR026265 		Lipopolysaccharide export system protein LptC Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
CBS domain
IPR000644 		CBS domain Domain 93 (70) No
Sugar isomerase (SIS)
IPR001347 		Sugar isomerase (SIS) Domain 88 (66) No

Close Representative InterPro domains - Consensus schema
IPR000644 IPR001347
KpsF-like, SIS domain
IPR035474 IPR004800

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)