Family GP004458


Family ID
GP004458  add to my list
Family name
Tyrosyl-trna synthetase, class ib, bacterial/mitochondrial family   suggest a name
Cross-reference(s)
PMID:
Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs.
2203971 PMID:
The aminoacyl-tRNA synthetase family: modules at work.
8274143
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 75
Species Sequence Count
1
1
1
3
4
4
3
1
1
2
1
1
1
1
3
1
1
1
1
1
1
2
2
1
1
1
5
2
1
2
1
1
3
1
1
1
4
2
1
1
2
1
1
1
3




Close InterPro family
IPR Annotation Type % Occurence Specificity
Aminoacyl-tRNA synthetase, class Ic
IPR002305 		Aminoacyl-tRNA synthetase, class Ic Family 96 (72) No
Tyrosine-tRNA ligase
IPR002307 		Tyrosine-tRNA ligase Family 89 (67) No
Tyrosine-tRNA ligase, bacterial-type
IPR024088 		Tyrosine-tRNA ligase, bacterial-type Family 51 (38) Yes
Tyrosine-tRNA ligase, bacterial-type, type 1
IPR024107 		Tyrosine-tRNA ligase, bacterial-type, type 1 Family 77 (58) No
Tyrosine-tRNA ligase, bacterial-type, type 2
IPR024108 		Tyrosine-tRNA ligase, bacterial-type, type 2 Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Aminoacyl-tRNA synthetase, class I, conserved site
IPR001412 		Aminoacyl-tRNA synthetase, class I, conserved site Conserved_site 88 (66) No
RNA-binding S4 domain
IPR002942 		RNA-binding S4 domain Domain 84 (63) No
Rossmann-like alpha/beta/alpha sandwich fold
IPR014729 		Rossmann-like alpha/beta/alpha sandwich fold Homologous_superfamily 89 (67) No
RNA-binding S4 domain superfamily
IPR036986 		RNA-binding S4 domain superfamily Homologous_superfamily 87 (65) No

Close Representative InterPro domains - Consensus schema
IPR002942 IPR036986 IPR014729 IPR001412 IPR002305 IPR024088 IPR002307 IPR024107

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)