Family GP016857


Family ID
GP016857  add to my list
Family name
Unannotated cluster   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
2


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 197
Species Sequence Count
10
4
5
3
8
5
7
2
12
5
3
2
6
2
3
10
3
1
2
4
4
6
2
3
2
2
5
6
5
3
8
4
2
1
1
3
2
3
7
2
2
3
3
4
11
6




Close InterPro family
IPR Annotation Type % Occurence Specificity
Transcription elongation factor Spt5, eukaryote
IPR017071 		Transcription elongation factor Spt5, eukaryote Family 34 (66) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
NGN domain
IPR005100 		NGN domain Domain 74 (145) No
KOW
IPR005824 		KOW Domain 79 (156) No
Ribosomal protein L2, domain 2
IPR014722 		Ribosomal protein L2, domain 2 Homologous_superfamily 81 (160) No
NusG, N-terminal domain superfamily
IPR036735 		NusG, N-terminal domain superfamily Homologous_superfamily 75 (148) No
NGN domain, eukaryotic
IPR039385 		NGN domain, eukaryotic Domain 72 (141) No
Spt5, KOW domain repeat 1
IPR041973 		Spt5, KOW domain repeat 1 Domain 72 (141) No

Close Representative InterPro domains - Consensus schema
Translation protein SH3-like domain superfamily
IPR008991 IPR014722 IPR005824 IPR036735 IPR039385
Spt5, KOW domain repeat 4
IPR041977 IPR005100 IPR041973
Spt5, KOW domain repeat 6
IPR041980 IPR017071

Close Domain architecture
Clustering




Alignment available at level 1 family (
N-acetylglucosaminyl transferase component family
GP003653 ).





Phylogeny tree available at level 1 family ( GP003653 ).