Family GP018379


Family ID
GP018379  add to my list
Family name
Zinc finger (CCCH-type) - RNA recognition motif (RRM)-containing protein family   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
2


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 128
Species Sequence Count
3
4
4
1
10
8
4
5
2
2
1
1
1
1
2
8
4
1
1
4
2
2
4
3
3
1
2
3
7
2
1
2
2
2
2
2
2
3
6
2
2
1
1
1
1
2




Close InterPro family
IPR Annotation Type % Occurence Specificity
Pre-mRNA-splicing factor Cwc2/Slt11
IPR039171 		Pre-mRNA-splicing factor Cwc2/Slt11 Family 57 (73) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
RNA recognition motif domain
IPR000504 		RNA recognition motif domain Domain 77 (99) No
Zinc finger, CCCH-type
IPR000571 		Zinc finger, CCCH-type Domain 75 (96) No
Nucleotide-binding alpha-beta plait domain superfamily
IPR012677 		Nucleotide-binding alpha-beta plait domain superfamily Homologous_superfamily 78 (100) No
RNA-binding domain superfamily
IPR035979 		RNA-binding domain superfamily Homologous_superfamily 78 (100) No

Close Representative InterPro domains - Consensus schema
IPR035979 IPR000504 IPR012677 IPR000571
Zinc finger, CCCH-type superfamily
IPR036855 IPR039171
Torus domain
IPR032297

Close Domain architecture
Clustering




Alignment available at level 1 family (
RNA recognition motif, RNP-1 superfamily
GP000026 ).





Phylogeny tree not available.