Family GP000780_V3


Family ID
CCAAT-HAP5 transcription factor family (plant-specificity: 19%) [OBSOLETE]
GP000780_V3 OBSOLETE  add to my list
Family name CCAAT-HAP5 transcription factor family
Creation date (last update: 2016-09-27 12:12:53)
Level 1
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 185



(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 185
Species Sequence Count
10
9
12
11
15
6
15
9
14
4
17
6
10
13
4
1
1
1
6
11
7
3




Species
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Download alignment file: 
FASTA




Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
185 172 (93%) 172 (93%) [84; 239; 862] ~237 75 75




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Species

Download tree file: 
XMLNewick


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
185 172 (93%) 172 (93%) [84; 239; 862] ~237 75 75